Plot HPD Intervals

Visualizes the Highest Posterior Density (HPD) intervals for each parameter in the MCMC output.

urc_HPD(model, parameters = NULL, deviance = FALSE, level = 0.95)

Arguments

model

A model object returned by UndercountR::urc_mcmc().

parameters

Optional character vector of parameter names to include. Default 'all' plots posteriors of all parameters except deviance

deviance

Logical specifying whether to include plot of posterior deviance. Default is deviance = FALSE.

level

Credible level(default is 0.95).

Value

A ggplot object showing HPD credible intervals.

Examples

if (FALSE) { # \dontrun{
output <- urc_mcmc(data = mydata)
urc_HPD(output$models$poisson)
} # }